Publications

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2021
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Emulsifier peptides derived from seaweed, methanotrophic bacteria, and potato proteins identified by quantitative proteomics and bioinformatics

Yesiltas, Betül ; Gregersen, Simon ; Lægsgaard, Linea ; Brinch, Maja L. ; Olsen, Tobias H. ; Marcatili, Paolo ; Overgaard, Michael T. ; Hansen, Egon B. ; Jacobsen, Charlotte ; García-Moreno, Pedro J.
in: Food Chemistry

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2021     |    DOI: https://doi.org/10.1016/j.foodchem.2021.130217

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Terminal deoxynucleotidyl transferase-mediated formation of protein binding polynucleotides

Ashley, Jon ; Schaap-Johansen, Anna-Lisa ; Mohammadniaei, Mohsen ; Naseri, Maryam ; Marcatili, Paolo ; Prado, Marta ; Sun, Yi
in: Nucleic acids research

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2021     |    DOI: https://doi.org/10.1093/nar/gkaa1263

 

The structure, viscoelasticity and charge of potato peptides adsorbed at the oil-water interface determine the physicochemical stability of fish oil-in-water emulsions

García Moreno, Pedro Jesús ; Yang, Jack ; Gregersen, Simon ; Jones, Nykola C. ; Berton-Carabin, Claire C. ; Sagis, Leonard M. C. ; Hoffmann, Søren Vrønning ; Marcatili, Paolo ; Overgaard, Michael T ; Hansen, Egon Bech ; Jacobsen, Charlotte
in: Food Hydrocolloids, vol: 115

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2021     |    DOI: https://doi.org/10.1016/j.foodhyd.2021.106605

2020
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AnOxPePred

Olsen, Tobias Hegelund ; Yesiltas, Betül ; Marin, Frederikke Isa ; Pertseva, Margarita ; García-Moreno, Pedro J ; Gregersen, Simon ; Overgaard, Michael Toft ; Jacobsen, Charlotte ; Lund, Ole ; Hansen, Egon Bech ; Marcatili, Paolo
in: Scientific Reports, vol: 10, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1038/s41598-020-78319-w

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Biofunctionality of Enzymatically Derived Peptides from Codfish (Gadus morhua) Frame: Bulk In Vitro Properties, Quantitative Proteomics, and Bioinformatic Prediction

Jafarpour, Ali ; Gregersen, Simon ; Marciel Gomes, Rocio ; Marcatili, Paolo ; Olsen, Tobias Hegelund ; Jacobsen, Charlotte ; Overgaard, Michael Toft ; Sørensen, Ann-Dorit Moltke
in: Marine Drugs, vol: 18, issue: 12

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.3390/md18120599

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Emulsifying peptides from potato protein predicted by bioinformatics: Stabilization of fish oil-in-water emulsions

García Moreno, Pedro Jesús ; Jacobsen, Charlotte ; Marcatili, Paolo ; Gregersen, Simon ; Overgaard, Michael T. ; Andersen, Mogens L. ; Sørensen, Ann-Dorit Moltke ; Hansen, Egon Bech
in: Food Hydrocolloids, vol: 101

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1016/j.foodhyd.2019.105529

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Identification of emulsifier potato peptides by bioinformatics: application to omega-3 delivery emulsions and release from potato industry side streams

García Moreno, Pedro Jesús ; Gregersen, Simon ; Nedamani, Elham Ranjbar ; Olsen, Tobias Hegelund ; Marcatili, Paolo ; Overgaard, Michael T ; Andersen, Mogens L ; Hansen, Egon Bech ; Jacobsen, Charlotte
in: Scientific Reports, vol: 10, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1038/s41598-019-57229-6

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Modeled Structure of the Cell Envelope Proteinase of Lactococcus lactis

Hansen, Egon Bech ; Marcatili, Paolo
in: Frontiers in Bioengineering and Biotechnology, vol: 8

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.3389/fbioe.2020.613986

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T cell receptor sequence clustering and antigen specificity

Vujovic, Milena ; Degn, Kristine Fredlund ; Marin, Frederikke Isa ; Schaap-Johansen, Anna-Lisa ; Chain, Benny ; Andresen, Thomas Lars ; Kaplinsky, Joseph ; Marcatili, Paolo
in: Computational and Structural Biotechnology Journal, vol: 18, pages: 2166-2173

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1016/j.csbj.2020.06.041

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The ABCD database: a repository for chemically defined antibodies

Lima, Wanessa C. ; Gasteiger, Elisabeth ; Marcatili, Paolo ; Duek, Paula ; Bairoch, Amos ; Cosson, Pierre
in: Nucleic acids research, vol: 48, issue: D1, pages: D261–D264

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1093/nar/gkz714